Mutational Analysis of Linalool Dehydratase Isomerase Suggests That Alcohol and Alkene Transformations Are Catalyzed Using Noncovalent Mechanisms
dc.contributor.author
dc.date.accessioned
2020-11-19T11:09:13Z
dc.date.available
2022-10-28T05:46:31Z
dc.date.issued
2020-10-02
dc.identifier.issn
2155-5435
dc.identifier.uri
dc.description.abstract
The interconversion of nonactivated alkenes and alcohols, catalyzed by (de)hydratases, has great potential in biotechnology for the generation of fine and bulk chemicals. LinD is a cofactor-independent enzyme that catalyzes the reversible (de)hydration of the tertiary alcohol (S)-linalool to the triene β-myrcene and also its isomerization to the primary alcohol geraniol. Structure-informed mutagenesis of LinD, followed by activity studies, confirmed essential roles for residues C171, C180, and H129 in water activation for the hydration of β-myrcene to linalool. However, no evidence of covalent thioterpene intermediates was found using either X-ray crystallography, mass spectrometry, or QM/MM nudged elastic band simulations. Labeling and NMR experiments confirmed a role for residue D39 in (de)protonation of the linalool carbon C10 in the isomerization of linalool to geraniol and also the intermediacy of β-myrcene in this isomerization reaction. X-ray, molecular dynamics, and activity studies also suggested a significant role in catalysis for a mobile methionine residue M125, which exists in substantially altered orientations in different mutant structures
dc.description.sponsorship
A.C. was funded by grant BB/P005578/1 from the BBSRC. We thank
Dr Johan P. Turkenburg and Mr Sam Hart for assistance with X-ray
data collection and the Diamond Light Source for access to beamlines
I02, I03 and I04-1 under proposal number mx-9948. The York Centre of Excellence in Mass Spectrometry was created thanks to a major
capital investment through Science City York, supported by Yorkshire
Forward with funds from the Northern Way Initiative, and
subsequent support from EPSRC (EP/K039660/1; EP/M028127/1).
This study was also supported in part by the European Research
Council Horizon 2020 research and innovation program (ERC-2015-
StG-679001, S.O.), Spanish MINECO (project PGC2018-102192-B-I00,
S.O.), Generalitat de Catalunya for the emerging group CompBioLab
(2017 SGR-1707); Juan de la Cierva-Incorporación fellowship IJCI2017-34129, J. I.F), and Marie Curie EnzVolNet fellowship (H2020-MSCA-IF-2016-753045, J. I. F)
dc.format.extent
11 p.
dc.format.mimetype
application/pdf
dc.language.iso
eng
dc.publisher
American Chemical Society (ACS)
dc.relation
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PGC2018-102192-B-I00/ES/EVOLUCION COMPUTACIONAL DE ENZIMAS MEDIANTE LA EXPLORACION DE LA SUPERFICIE CONFORMACIONAL/
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Versió postprint del document publicat a: https://doi.org/10.1021/acscatal.0c02958
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© ACS Catalysis, 2020, vol. 10, núm. 19, p. 11136-11146
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Articles publicats (D-Q)
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Tots els drets reservats
dc.source
Cuetos, Anibal Iglesias-Fernández, Javier Danesh-Azari, Hamid-Reza Zukic, Erna Dowle, Adam Osuna Oliveras, Sílvia Grogan, Gideon 2020 Mutational Analysis of Linalool Dehydratase Isomerase Suggests That Alcohol and Alkene Transformations Are Catalyzed Using Noncovalent Mechanisms ACS Catalysis 10 19 11136 11146
dc.title
Mutational Analysis of Linalool Dehydratase Isomerase Suggests That Alcohol and Alkene Transformations Are Catalyzed Using Noncovalent Mechanisms
dc.type
info:eu-repo/semantics/article
dc.rights.accessRights
info:eu-repo/semantics/openAccess
dc.embargo.terms
2021-10-02T00:00:00Z
dc.date.embargoEndDate
info:eu-repo/date/embargoEnd/2021-10-02
dc.relation.projectID
info:eu-repo/grantAgreement/EC/H2020/679001/EU/Network models for the computational design of proficient enzymes/NetMoDEzyme
info:eu-repo/grantAgreement/EC/H2020/753045/EU/COMPUTATIONAL EVOLUTION OF ENZYME VARIANTS THROUGH CONFORMATIONAL NETWORKS/EnzVolNet
dc.type.version
info:eu-repo/semantics/acceptedVersion
dc.identifier.doi
dc.identifier.idgrec
032128
dc.contributor.funder
dc.type.peerreviewed
peer-reviewed
dc.relation.FundingProgramme
dc.relation.ProjectAcronym
dc.identifier.eissn
2155-5435